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Introduction - PRSTools
Step1-DownloadSampleDataandSetupEnvironment
Step2-GWASAndIndividualGenotypeDataQualityControls
Polygenic Risk Score Tools Notebooks Workflow
Plink
PRSice-2
DBSLMM
GCTA
Lassosum
LDpred-2-Inf
LDpred-2-Grid
LDpred-2-Auto
LDpred-2-Lassosum
LDpred-funct
GCTB: Calculating PRS with SBayesR
GCTB-SBayesRC
LDAK-GenotypeData
LDAK-GWAS
PRScs
PRScsx
tlpSum
PRSbils
CTPR
NPS
SDPR
JAMPred
EB-PRS
PANPRS
BOLT-LMM
RapidoPGS-single
LDpred-gibbs
LDpred-fast
LDpred-p+t
LDpred-inf
AnnoPred
PleioPred
smtpredwMtOLS
smtpredwMtSBLUP
C+T
VIPRS-simple
VIPRS-grid
HAIL
GEMMA-LM
GEMMA-LMM
GEMMA-BSLMM
MTG2
SCT
XPBLUP
CTSLEB
PolyPred
Repository
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